Exploration of Potential Anti‐Inflammatory Cum Anti‐Rheumatoid‐Arthritis Phyto‐Molecule Through Integrated Green Approach: Network Pharmacology, Molecular Docking, Molecular Dynamics, <i>In‐Vitro</i> and <i>Ex‐Vivo</i> Study

Rheumatoid arthritis (RA) and associated inflammatory complications are the most prevalent illnesses and can turn into fatal conditions if left untreated. Allopathic medicine is not satisfactory for curing RA. Scientific literature reports reveal that several phyto-compounds viz. flavonoids, saponins, and terpenoids, can heal joints and organs from auto-inflammatory rheumatoid arthritis and pain. Gene ontology, gene network analysis, molecular clustering, and literature review were used to optimise RA-specific highly expressed genes. In-silico molecular docking was performed to short-out potential phytomolecules (Neohesperidin dihydrochalcone (NHDC)) from 1000 datasets-library against RA and validate using MD simulation running at 100 ns. In-vitro anti-inflammatory assays of NHDC inhibited egg-albumin denaturation, IC<sub>50</sub> of 47.739±0.51 μg/ml. The ex-vivo MTT assay with NHDC rendered 67.209 % inhibition at 100 μM against fd-FLS-cells. NHDC downregulated pro-inflammatory cytokine IL-17 A production by 61.11 % and 50 % at 300 and 200 μM, respectively. Thus, this Studies recommend that NHDC may be highlighted as a novel multi-target PADI4 and JAK3 inhibitor with better efficacy and minimal toxicity in RA warranted to In-Vivo and clinical investigation. The current findings have uncovered remarkable genes and signalling pathways linked to RA, which could enhance our existing comprehension of the molecular mechanisms that drive its development and progression.

Authors

Institutions

Publication Details

Journal
Chemistry & Biodiversity
Published
2024-08-25
DOI
https://doi.org/10.1002/cbdv.202401137
Citations
4
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
1.45

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Exploration of Potential Anti‐Inflammatory Cum Anti‐Rheumatoid‐Arthritis Phyto‐Molecule Through Integrated Green Approach: Network Pharmacology, Molecular Docking, Molecular Dynamics, In‐Vitro and Ex‐Vivo Study

Abhishek Saha, Partha Palit, Avik Sarkar, Abu Md Ashif Ikbal et al.
4 citations
Chemistry & Biodiversity
Computational Drug Discovery Methods
1.45
article

Exploration of Potential Anti‐Inflammatory Cum Anti‐Rheumatoid‐Arthritis Phyto‐Molecule Through Integrated Green Approach: Network Pharmacology, Molecular Docking, Molecular Dynamics, In‐Vitro and Ex‐Vivo Study

Abhishek Saha, Partha Palit, Avik Sarkar, Abu Md Ashif Ikbal, Monjur Ahmed Laskar, Santosh Kumar Singh, Prashant Bhardwaj, Hanieh Kargarzadeh, Parasar Ghosh, Amresh Kumar, Manabendra Dutta Choudhury, Suprio Das
article en
4 citations

Abstract

Rheumatoid arthritis (RA) and associated inflammatory complications are the most prevalent illnesses and can turn into fatal conditions if left untreated. Allopathic medicine is not satisfactory for curing RA. Scientific literature reports reveal that several phyto-compounds viz. flavonoids, saponins, and terpenoids, can heal joints and organs from auto-inflammatory rheumatoid arthritis and pain. Gene ontology, gene network analysis, molecular clustering, and literature review were used to optimise RA-specific highly expressed genes. In-silico molecular docking was performed to short-out potential phytomolecules (Neohesperidin dihydrochalcone (NHDC)) from 1000 datasets-library against RA and validate using MD simulation running at 100 ns. In-vitro anti-inflammatory assays of NHDC inhibited egg-albumin denaturation, IC<sub>50</sub> of 47.739±0.51 μg/ml. The ex-vivo MTT assay with NHDC rendered 67.209 % inhibition at 100 μM against fd-FLS-cells. NHDC downregulated pro-inflammatory cytokine IL-17 A production by 61.11 % and 50 % at 300 and 200 μM, respectively. Thus, this Studies recommend that NHDC may be highlighted as a novel multi-target PADI4 and JAK3 inhibitor with better efficacy and minimal toxicity in RA warranted to In-Vivo and clinical investigation. The current findings have uncovered remarkable genes and signalling pathways linked to RA, which could enhance our existing comprehension of the molecular mechanisms that drive its development and progression.

Chemistry & BiodiversityVol. 21(12)
National Institute of Technology Agartala (IN), Institute of Post Graduate Medical Education and Research (IN), AISECT University (IN), Centrum Badań Molekularnych i Makromolekularnych Polskiej Akademii Nauk (PL), Assam University (IN), Indian Institute of Technology BHU (IN), Banaras Hindu University (IN), Polish Academy of Sciences (PL)
Department of Biotechnology, Ministry of Science and Technology, India
Openalex Percentile: Top 16%
Computational Drug Discovery Methods
1.45
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.