Genetic diversity and phylogenetic tree of Butis genus in the Vietnamese Mekong Delta based on mitochondrial cytochrome b gene sequences

The genus Butis comprises fishes with relatively small body size and wide salinity tolerance allowing them to adapt to various environments. This research aims to analyze their phylogenetic relationships through the mitochondrial cytochrome b gene (Cyt b) sequencing. The results revealed that the population of Butis species had nine haplotypes with a haplotype diversity index of 0.67–1.00. The Cyt b gene sequences were rich in %C (30–31%) and low in %G (14–16 %). %AT was always higher than %GC while the AT/GC ratio was constant between Cyt b sequences. The intraspecific genetic distances were 0.001–0.004; meanwhile, the interspecific genetic distances were 0.003–0.203. All B. koilomatodon were in clade I of the phylogeny with a bootstrap value of 69%. Butis humeralis and B. butis were not grouped by species as B. koilomatodon but interspersed in the sub-clades of clade II with bootstrap values as high as 100%. Simultaneous use of mitochondrial DNA and nuclear DNA barcoding is recommended to conduct more precise identification of B. humeralis and B. butis in future research due to their great similarity in morphology and Cyt b gene sequences.

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Publication Details

Journal
The Egyptian Journal of Aquatic Research
Published
2024-08-23
DOI
https://doi.org/10.1016/j.ejar.2024.07.006
Citations
2
Primary Topic
Identification and Quantification in Food
Type
article
Field-Weighted Citation Impact
0.47
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article

Genetic diversity and phylogenetic tree of Butis genus in the Vietnamese Mekong Delta based on mitochondrial cytochrome b gene sequences

Ton Huu Duc Nguyen, Tran Thi Huyen Lam, Gieo Hoang Phan, Quang Minh Dinh
2 citations
The Egyptian Journal of Aquatic Research
Identification and Quantification in Food
0.47
article

Genetic diversity and phylogenetic tree of Butis genus in the Vietnamese Mekong Delta based on mitochondrial cytochrome b gene sequences

Ton Huu Duc Nguyen, Tran Thi Huyen Lam, Gieo Hoang Phan, Quang Minh Dinh
article en
2 citations

Abstract

The genus Butis comprises fishes with relatively small body size and wide salinity tolerance allowing them to adapt to various environments. This research aims to analyze their phylogenetic relationships through the mitochondrial cytochrome b gene (Cyt b) sequencing. The results revealed that the population of Butis species had nine haplotypes with a haplotype diversity index of 0.67–1.00. The Cyt b gene sequences were rich in %C (30–31%) and low in %G (14–16 %). %AT was always higher than %GC while the AT/GC ratio was constant between Cyt b sequences. The intraspecific genetic distances were 0.001–0.004; meanwhile, the interspecific genetic distances were 0.003–0.203. All B. koilomatodon were in clade I of the phylogeny with a bootstrap value of 69%. Butis humeralis and B. butis were not grouped by species as B. koilomatodon but interspersed in the sub-clades of clade II with bootstrap values as high as 100%. Simultaneous use of mitochondrial DNA and nuclear DNA barcoding is recommended to conduct more precise identification of B. humeralis and B. butis in future research due to their great similarity in morphology and Cyt b gene sequences.

The Egyptian Journal of Aquatic ResearchVol. 50(4)
Can Tho University (VN), Vinh Long University of Technology Education (VN), An Giang University (VN)
Openalex Percentile: Top 36%
Identification and Quantification in Food
0.47
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Genetic diversity and phylogenetic tree of Butis genus in the Vietnamese Mekong Delta based on mitochondrial cytochrome b gene sequences — Ton Huu Duc Nguyen, Tran Thi Huyen Lam, et al. · The Egyptian Journal of Aquatic Research (2024) | TGRS Research Map | TGRS