Microenvironmental entropy dynamics analysis reveals novel insights into Notch-Delta-Jagged decision-making mechanism

Notch-Delta-Jagged (NDJ) signaling among neighboring cells contributes crucially to spatiotemporal pattern formation and developmental decision-making. Despite numerous detailed mathematical models, their high-dimensionality parametric space limits analytical treatment, especially regarding local microenvironmental fluctuations. Using the low-dimensional dynamics of the recently postulated least microenvironmental uncertainty principle (LEUP) framework, we showcase how the LEUP formalism recapitulates a noisy NDJ spatial patterning. Our LEUP simulations show that local phenotypic entropy increases for lateral inhibition but decreases for lateral induction. This distinction allows us to identify a critical parameter that captures the transition from a Notch-Delta-driven lateral inhibition to a Notch-Jagged-driven lateral induction phenomenon and suggests random phenotypic patterning in the case of lack of dominance of either Notch-Delta or Notch-Jagged signaling. Our results enable an analytical treatment to map the high-dimensional dynamics of NDJ signaling on tissue-level patterning and can possibly be generalized to decode operating principles of collective cellular decision-making.

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Publication Details

Journal
iScience
Published
2024-08-23
DOI
https://doi.org/10.1016/j.isci.2024.110569
Citations
3
Primary Topic
Gene Regulatory Network Analysis
Type
article
Field-Weighted Citation Impact
0.70

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article

Microenvironmental entropy dynamics analysis reveals novel insights into Notch-Delta-Jagged decision-making mechanism

Divyoj Singh, Partha S. Dey, Haralampos Hatzikirou, Ushasi Roy et al.
3 citations
iScience
Gene Regulatory Network Analysis
0.70
article

Microenvironmental entropy dynamics analysis reveals novel insights into Notch-Delta-Jagged decision-making mechanism

Divyoj Singh, Partha S. Dey, Haralampos Hatzikirou, Ushasi Roy, Arnab Barua, Aditi Ajith Pujar, Mohit Kumar Jolly
article en
3 citations

Abstract

Notch-Delta-Jagged (NDJ) signaling among neighboring cells contributes crucially to spatiotemporal pattern formation and developmental decision-making. Despite numerous detailed mathematical models, their high-dimensionality parametric space limits analytical treatment, especially regarding local microenvironmental fluctuations. Using the low-dimensional dynamics of the recently postulated least microenvironmental uncertainty principle (LEUP) framework, we showcase how the LEUP formalism recapitulates a noisy NDJ spatial patterning. Our LEUP simulations show that local phenotypic entropy increases for lateral inhibition but decreases for lateral induction. This distinction allows us to identify a critical parameter that captures the transition from a Notch-Delta-driven lateral inhibition to a Notch-Jagged-driven lateral induction phenomenon and suggests random phenotypic patterning in the case of lack of dominance of either Notch-Delta or Notch-Jagged signaling. Our results enable an analytical treatment to map the high-dimensional dynamics of NDJ signaling on tissue-level patterning and can possibly be generalized to decode operating principles of collective cellular decision-making.

iScienceVol. 27(9)
Tata Institute of Fundamental Research (IN), Khalifa University of Science and Technology (AE), Indian Institute of Science Bangalore (IN), Technische Universität Dresden (DE)
Indian Institute of Science, Al Jalila Foundation, Department of Science and Technology, Ministry of Science and Technology, India, Volkswagen Foundation, Bundesministerium für Bildung und Forschung, Khalifa University of Science, Technology and Research, National Institutes of Health, Science and Engineering Research Board
Peace, Justice and strong institutions
Openalex Percentile: Top 30%
Gene Regulatory Network Analysis
0.70
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