Crystal structures of two unexpected products of vicinal diamines left to crystallize in acetone

Herein we report the crystal structures of two benzodiazepines obtained by reacting N,N'-(4,5-diamino-1,2-phenylene)bis(4-methylbenzenesulfonamide) (1) or 4,5-(4-methylbenzenesulfonamido)benzene-1,2-diaminium dichloride (1·2HCl) with acetone, giving 2,2,4-trimethyl-8,9-bis(4-methylbenzenesulfonamido)-2,3-dihydro-5H-1,5-benzodiazepine, C<sub>26</sub>H<sub>30</sub>N<sub>4</sub>O<sub>4</sub>S<sub>2</sub> (2), and 2,2,4-trimethyl-8,9-bis(4-methylbenzenesulfonamido)-2,3-dihydro-5H-1,5-benzodiazepin-1-ium chloride 0.3-hydrate, C<sub>26</sub>H<sub>31</sub>N<sub>4</sub>O<sub>4</sub>S<sub>2</sub><sup>+</sup>·Cl<sup>-</sup>·0.3H<sub>2</sub>O (3). Compounds 2 and 3 were first obtained in attempts to recrystallize 1 and 1·2HCl using acetone as solvent. This solvent reacted with the vicinal diamines present in the molecular structures, forming a 5H-1,5-benzodiazepine ring. In the crystal structure of 2, the seven-membered ring of benzodiazepine adopts a boat-like conformation, while upon protonation, observed in the crystal structure of 3, it adopts an envelope-like conformation. In both crystalline compounds, the tosylamide N atoms are not in resonance with the arene ring, mainly due to hydrogen bonds and steric hindrance caused by the large vicinal groups in the aromatic ring. At a supramolecular level, the crystal structure is maintained by a combination of hydrogen bonds and hydrophobic interactions. In 2, amine-to-tosyl N-H...O and amide-to-imine N-H...N hydrogen bonds can be observed. In contrast, in 3, the chloride counter-ion and water molecule result in most of the hydrogen bonds being of the amide-to-chloride and ammonium-to-chloride N-H...Cl types, while the amine interacts with the tosyl group, as seen in 2. In conclusion, we report the synthesis of 1, 1·2HCl and 2, as well as their chemical characterization. For 2, two synthetic methods are described, i.e. solvent-mediated crystallization and synthesis via a more efficient and cleaner route as a polycrystalline material. Salt 3 was only obtained as presented, with only a few crystals being formed.

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Journal
Acta Crystallographica Section C Structural Chemistry
Published
2024-08-23
DOI
https://doi.org/10.1107/s2053229624007320
Citations
2
Primary Topic
Phenothiazines and Benzothiazines Synthesis and Activities
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article
Field-Weighted Citation Impact
0.47

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article

Crystal structures of two unexpected products of vicinal diamines left to crystallize in acetone

Willian X. C. Oliveira, Bruno Dival, Letícia Develly, Leonardo Pitinato
2 citations
Acta Crystallographica Section C Structural Chemistry
Phenothiazines and Benzothiazines Synthesis and Activities
0.47
article

Crystal structures of two unexpected products of vicinal diamines left to crystallize in acetone

Willian X. C. Oliveira, Bruno Dival, Letícia Develly, Leonardo Pitinato
article en
2 citations

Abstract

Herein we report the crystal structures of two benzodiazepines obtained by reacting N,N'-(4,5-diamino-1,2-phenylene)bis(4-methylbenzenesulfonamide) (1) or 4,5-(4-methylbenzenesulfonamido)benzene-1,2-diaminium dichloride (1·2HCl) with acetone, giving 2,2,4-trimethyl-8,9-bis(4-methylbenzenesulfonamido)-2,3-dihydro-5H-1,5-benzodiazepine, C<sub>26</sub>H<sub>30</sub>N<sub>4</sub>O<sub>4</sub>S<sub>2</sub> (2), and 2,2,4-trimethyl-8,9-bis(4-methylbenzenesulfonamido)-2,3-dihydro-5H-1,5-benzodiazepin-1-ium chloride 0.3-hydrate, C<sub>26</sub>H<sub>31</sub>N<sub>4</sub>O<sub>4</sub>S<sub>2</sub><sup>+</sup>·Cl<sup>-</sup>·0.3H<sub>2</sub>O (3). Compounds 2 and 3 were first obtained in attempts to recrystallize 1 and 1·2HCl using acetone as solvent. This solvent reacted with the vicinal diamines present in the molecular structures, forming a 5H-1,5-benzodiazepine ring. In the crystal structure of 2, the seven-membered ring of benzodiazepine adopts a boat-like conformation, while upon protonation, observed in the crystal structure of 3, it adopts an envelope-like conformation. In both crystalline compounds, the tosylamide N atoms are not in resonance with the arene ring, mainly due to hydrogen bonds and steric hindrance caused by the large vicinal groups in the aromatic ring. At a supramolecular level, the crystal structure is maintained by a combination of hydrogen bonds and hydrophobic interactions. In 2, amine-to-tosyl N-H...O and amide-to-imine N-H...N hydrogen bonds can be observed. In contrast, in 3, the chloride counter-ion and water molecule result in most of the hydrogen bonds being of the amide-to-chloride and ammonium-to-chloride N-H...Cl types, while the amine interacts with the tosyl group, as seen in 2. In conclusion, we report the synthesis of 1, 1·2HCl and 2, as well as their chemical characterization. For 2, two synthetic methods are described, i.e. solvent-mediated crystallization and synthesis via a more efficient and cleaner route as a polycrystalline material. Salt 3 was only obtained as presented, with only a few crystals being formed.

Acta Crystallographica Section C Structural ChemistryVol. 80(9)
Universidade Federal de Minas Gerais (BR)
Conselho Nacional de Desenvolvimento Científico e Tecnológico, Fundação de Amparo à Pesquisa do Estado de Minas Gerais
Clean water and sanitation
Openalex Percentile: Top 36%
Phenothiazines and Benzothiazines Synthesis and Activities
0.47
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