Grounded Persistent Path Homology: A Stable, Topological Descriptor for Weighted Digraphs
Abstract Weighted digraphs are used to model a variety of natural systems and can exhibit interesting structure across a range of scales. In order to understand and compare these systems, we require stable, interpretable, multiscale descriptors. To this end, we propose grounded persistent path homology ( GrPPH )—a new, functorial, topological descriptor that describes the structure of an edge-weighted digraph via a persistence barcode. We show there is a choice of circuit basis for the graph which yields geometrically interpretable representatives for the features in the barcode. Moreover, we show the barcode is stable, in bottleneck distance, to both numerical and structural perturbations.
Authors
- Heather A. Harrington (ORCID: https://orcid.org/0000-0002-1705-7869)
- Ulrike Tillmann (ORCID: https://orcid.org/0000-0002-8076-7660)
- Thomas Chaplin (ORCID: https://orcid.org/0000-0002-4395-5654)
Institutions
- Isaac Newton Institute for Mathematical Sciences (GB)
- University of Cambridge (GB)
- University of Oxford (GB)
- Center for Systems Biology Dresden (DE)
- Max Planck Institute of Molecular Cell Biology and Genetics (DE)
- Technische Universität Dresden (DE)
Publication Details
- Journal
- Foundations of Computational Mathematics
- Published
- 2024-08-23
- DOI
- https://doi.org/10.1007/s10208-024-09679-2
- Citations
- 3
- Primary Topic
- Topological and Geometric Data Analysis
- Type
- article
- Field-Weighted Citation Impact
- 1.08
Funders
- Engineering and Physical Sciences Research Council