Temperature effects on the branching dynamics in the model ambimodal (6 + 4)/(4 + 2) intramolecular cycloaddition reaction

C<sub>14</sub>H<sub>20</sub> (tetradecapentaene) is a simple model system exhibiting post transition-state behavior, wherein both the (6 + 4) and (4 + 2) cycloaddition products are formed from one ambimocal transition state structure. We studied the bifurcation dynamics starting from the two ambimodal transition state structures, the chair-form and boat-form, using the quasi-classical trajectory, classical molecular dynamics, and ring-polymer molecular dynamics methods on the parameter-optimized semiempirical GFN2-xTB potential energy surface. It was found that the calculated branching fractions differ between the chair-form and boat-form due to the different nature in the IRC pathways. We also investigated the effects of temperature on bifurcation dynamics and found that, at higher temperatures, trajectories stay longer in the intermediate region of the potential energy surface.

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Publication Details

Journal
Journal of Computational Chemistry
Published
2024-08-21
DOI
https://doi.org/10.1002/jcc.27484
Citations
6
Primary Topic
Advanced Chemical Physics Studies
Type
article
Field-Weighted Citation Impact
2.03

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article

Temperature effects on the branching dynamics in the model ambimodal (6 + 4)/(4 + 2) intramolecular cycloaddition reaction

Tatsuhiro Murakami, Yuya Kikuma, Toshiyuki Takayanagi, Daiki Hayashi et al.
6 citations
Journal of Computational Chemistry
Advanced Chemical Physics Studies
2.03
article

Temperature effects on the branching dynamics in the model ambimodal (6 + 4)/(4 + 2) intramolecular cycloaddition reaction

Tatsuhiro Murakami, Yuya Kikuma, Toshiyuki Takayanagi, Daiki Hayashi, Keita Yamaki
article en
6 citations

Abstract

C<sub>14</sub>H<sub>20</sub> (tetradecapentaene) is a simple model system exhibiting post transition-state behavior, wherein both the (6 + 4) and (4 + 2) cycloaddition products are formed from one ambimocal transition state structure. We studied the bifurcation dynamics starting from the two ambimodal transition state structures, the chair-form and boat-form, using the quasi-classical trajectory, classical molecular dynamics, and ring-polymer molecular dynamics methods on the parameter-optimized semiempirical GFN2-xTB potential energy surface. It was found that the calculated branching fractions differ between the chair-form and boat-form due to the different nature in the IRC pathways. We also investigated the effects of temperature on bifurcation dynamics and found that, at higher temperatures, trajectories stay longer in the intermediate region of the potential energy surface.

Journal of Computational ChemistryVol. 45(32)
Sophia University (JP), Saitama University (JP)
Institute for Quantum Chemical Exploration, Japan Society for the Promotion of Science
Affordable and clean energy
Openalex Percentile: Top 13%
Advanced Chemical Physics Studies
2.03
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