Phase‐Separated Droplets Can Direct the Kinetics of Chemical Reactions Including Polymerization, Self‐Replication and Oscillating Networks

Abstract Phase‐separated compartments can localize (bio)chemical reactions and influence their kinetics. They are believed to play an important role both in extant life in the form of biomolecular condensates and at the origins of life as coacervate protocells. However, experimentally testing the influence of coacervates on different reactions is challenging and time‐consuming. We therefore use a numerical model to explore the effect of phase‐separated droplets on the kinetics and outcome of different chemical reaction systems, where we vary the coacervate volume and partitioning of reactants. We find that the rate of bimolecular reactions has an optimal dilute/coacervate phase volume ratio for a given reactant partitioning. Furthermore, coacervates can accelerate polymerization and self‐replication reactions and lead to formation of longer polymers. Lastly, we find that coacervates can ‘rescue’ oscillating reaction networks in concentration regimes where sustained oscillations do not occur in a single‐phase system. Our results indicate that coacervates can direct the outcome of a wide range of reactions and impact fundamental aspects such as yield, reaction pathway selection, product length and emergent functions. This may have far‐reaching implications for origins of life, synthetic cells and the fate and function of biological condensates.

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Publication Details

Journal
ChemSystemsChem
Published
2024-08-21
DOI
https://doi.org/10.1002/syst.202400056
Citations
11
Primary Topic
Earth Systems and Cosmic Evolution
Type
article
Field-Weighted Citation Impact
4.14

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article

Phase‐Separated Droplets Can Direct the Kinetics of Chemical Reactions Including Polymerization, Self‐Replication and Oscillating Networks

Wojciech P. Lipiński, Brent S. Visser, Evan Spruijt, Karina K. Nakashima et al.
11 citations
ChemSystemsChem
Earth Systems and Cosmic Evolution
4.14
article

Phase‐Separated Droplets Can Direct the Kinetics of Chemical Reactions Including Polymerization, Self‐Replication and Oscillating Networks

Wojciech P. Lipiński, Brent S. Visser, Evan Spruijt, Karina K. Nakashima, Iris B. A. Smokers
article en
11 citations

Abstract

Abstract Phase‐separated compartments can localize (bio)chemical reactions and influence their kinetics. They are believed to play an important role both in extant life in the form of biomolecular condensates and at the origins of life as coacervate protocells. However, experimentally testing the influence of coacervates on different reactions is challenging and time‐consuming. We therefore use a numerical model to explore the effect of phase‐separated droplets on the kinetics and outcome of different chemical reaction systems, where we vary the coacervate volume and partitioning of reactants. We find that the rate of bimolecular reactions has an optimal dilute/coacervate phase volume ratio for a given reactant partitioning. Furthermore, coacervates can accelerate polymerization and self‐replication reactions and lead to formation of longer polymers. Lastly, we find that coacervates can ‘rescue’ oscillating reaction networks in concentration regimes where sustained oscillations do not occur in a single‐phase system. Our results indicate that coacervates can direct the outcome of a wide range of reactions and impact fundamental aspects such as yield, reaction pathway selection, product length and emergent functions. This may have far‐reaching implications for origins of life, synthetic cells and the fate and function of biological condensates.

ChemSystemsChemVol. 7(1)
Centre National de la Recherche Scientifique (FR), Radboud University Nijmegen (NL), Institut de Science et d'Ingénierie Supramoléculaires (FR), Université de Strasbourg (FR)
European Commission, Nederlandse Organisatie voor Wetenschappelijk Onderzoek, European Research Council
Openalex Percentile: Top 5%
Earth Systems and Cosmic Evolution
4.14
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