A Method for Inferring Polymers Based on Linear Regression and Integer Programming

A novel framework has recently been proposed for designing the molecular structure of chemical compounds with a desired chemical property using both artificial neural networks and mixed integer linear programming. In this paper, we design a new method for inferring a polymer based on the framework. For this, we introduce a new way of representing a polymer as a form of monomer and define new descriptors that feature the structure of polymers. We also use linear regression as a building block of constructing a prediction function in the framework. The results of our computational experiments reveal a set of chemical properties on polymers to which a prediction function constructed with linear regression performs well. We also observe that the proposed method can infer polymers with up to 50 non-hydrogen atoms in a monomer form.

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Publication Details

Journal
IEEE/ACM Transactions on Computational Biology and Bioinformatics
Published
2024-08-22
DOI
https://doi.org/10.1109/tcbb.2024.3447780
Citations
5
Primary Topic
Industrial Vision Systems and Defect Detection
Type
article
Field-Weighted Citation Impact
1.74

Funders

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article

A Method for Inferring Polymers Based on Linear Regression and Integer Programming

Tatsuya Akutsu, Jianshen Zhu, Ryota Ido, Shengjuan Cao et al.
5 citations
IEEE/ACM Transactions on Computational Biology and Bioinformatics
Industrial Vision Systems and Defect Detection
1.74
article

A Method for Inferring Polymers Based on Linear Regression and Integer Programming

Tatsuya Akutsu, Jianshen Zhu, Ryota Ido, Shengjuan Cao, Naveed Ahmed Azam, Hiroshi Nagamochi, Kazuya Haraguchi, Liang Zhao
article en
5 citations

Abstract

A novel framework has recently been proposed for designing the molecular structure of chemical compounds with a desired chemical property using both artificial neural networks and mixed integer linear programming. In this paper, we design a new method for inferring a polymer based on the framework. For this, we introduce a new way of representing a polymer as a form of monomer and define new descriptors that feature the structure of polymers. We also use linear regression as a building block of constructing a prediction function in the framework. The results of our computational experiments reveal a set of chemical properties on polymers to which a prediction function constructed with linear regression performs well. We also observe that the proposed method can infer polymers with up to 50 non-hydrogen atoms in a monomer form.

IEEE/ACM Transactions on Computational Biology and BioinformaticsVol. 21(6)
Quaid-i-Azam University (PK), Kyoto University (JP), Kyoto University Institute for Chemical Research
Japan Society for the Promotion of Science
Openalex Percentile: Top 14%
Industrial Vision Systems and Defect Detection
1.74
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A Method for Inferring Polymers Based on Linear Regression and Integer Programming — Tatsuya Akutsu, Jianshen Zhu, et al. · IEEE/ACM Transactions on Computational Biology and Bioinformatics (2024) | TGRS Research Map | TGRS