Coexistence of plasmid-mediated <i>tmexCD2-toprJ2</i> , <i>bla</i> <sub>IMP-4</sub> , and <i>bla</i> <sub>NDM-1</sub> in <i>Klebsiella quasipneumoniae</i>

<i>Klebsiella quasipneumoniae</i> is a potential pathogen that has not been studied comprehensively. The emergence of multidrug-resistant (MDR) <i>K. quasipneumoniae</i>, specifically strains resistant to tigecycline and carbapenem, presents a significant challenge to clinical treatment. This investigation aimed to characterize MDR <i>K. quasipneumoniae</i> strain FK8966, co-carrying <i>tmexCD2-toprJ2</i>, <i>bla</i><sub>IMP-4</sub>, and <i>bla</i><sub>NDM-1</sub> by plasmids. It was observed that FK8966's MDR was primarily because of the IncHI1B-like plasmid co-carrying <i>tmexCD2-toprJ2</i> and <i>bla</i><sub>IMP-4</sub>, and an IncFIB(K)/IncFII(K) plasmid harboring <i>bla</i><sub>NDM-1</sub>. Furthermore, the phylogenetic analysis revealed that IncHI1B-like plasmids carrying <i>tmexCD2-toprJ2</i> were disseminated among different bacteria, specifically in China. Additionally, according to the comparative genomic analysis, the MDR regions indicated that the <i>tmexCD2-toprJ2</i> gene cluster was inserted into the <i>umuC</i> gene, while <i>bla</i><sub>IMP-4</sub> was present in transposon Tn<i>As3</i> linked to the class 1 integron (<i>IntI1</i>). It was also observed that an ΔTn<i>3000</i> insertion with <i>bla</i><sub>NDM-1</sub> made a novel <i>bla</i><sub>NDM-1</sub> harboring IncFIB(K)/IncFII(K) plasmid. The antimicrobial resistance prevalence and phylogenetic analyses of <i>K. quasipneumoniae</i> strains indicated that FK8966 is a distinct MDR branch of <i>K. quasipneumoniae</i>. Furthermore, CRISPR-Cas system analysis showed that many <i>K. quasipneumoniae</i> CRISPR-Cas systems lacked spacers matching the two aforementioned novel resistance plasmids, suggesting that these resistance plasmids have the potential to disseminate within <i>K. quasipneumoniae</i>. Therefore, the spread of MDR <i>K. quasipneumoniae</i> and plasmids warrants further attention.IMPORTANCEThe emergence of multidrug-resistant <i>K. quasipneumoniae</i> poses a great threat to clinical care, and the situation is exacerbated by the dissemination of tigecycline- and carbapenem-resistant genes. Therefore, monitoring these pathogens and their resistance plasmids is urgent and crucial. This study identified tigecycline- and carbapenem-resistant <i>K. quasipneumoniae</i> strain, FK8966. Furthermore, it is the first study to report the coexistence of <i>tmexCD2-toprJ2</i>, <i>bla</i><sub>IMP-4</sub>, and <i>bla</i><sub>NDM-1</sub> in <i>K. quasipneumoniae</i>. Moreover, the CRISPR-Cas system of many <i>K. quasipneumoniae</i> lacks spacers that match the plasmids carried by FK8966, which are crucial for mediating resistance against tigecycline and carbapenems, indicating their potential to disseminate within <i>K. quasipneumoniae</i>.

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Journal
Microbiology Spectrum
Published
2024-08-20
DOI
https://doi.org/10.1128/spectrum.03874-23
Citations
5
Primary Topic
Antibiotic Resistance in Bacteria
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article
Field-Weighted Citation Impact
0.85
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article

Coexistence of plasmid-mediated tmexCD2-toprJ2 , bla IMP-4 , and bla NDM-1 in Klebsiella quasipneumoniae

Jianming Cao, Tieli Zhou, Panjie Hu, Changrui Qian et al.
5 citations
Microbiology Spectrum
Antibiotic Resistance in Bacteria
0.85
article

Coexistence of plasmid-mediated tmexCD2-toprJ2 , bla IMP-4 , and bla NDM-1 in Klebsiella quasipneumoniae

Jianming Cao, Tieli Zhou, Panjie Hu, Changrui Qian, Zhuocheng Yao, Miran Tang, Deyi Zhao, Kaixin Chen, Zhexiao Ma
article en
5 citations

Abstract

<i>Klebsiella quasipneumoniae</i> is a potential pathogen that has not been studied comprehensively. The emergence of multidrug-resistant (MDR) <i>K. quasipneumoniae</i>, specifically strains resistant to tigecycline and carbapenem, presents a significant challenge to clinical treatment. This investigation aimed to characterize MDR <i>K. quasipneumoniae</i> strain FK8966, co-carrying <i>tmexCD2-toprJ2</i>, <i>bla</i><sub>IMP-4</sub>, and <i>bla</i><sub>NDM-1</sub> by plasmids. It was observed that FK8966's MDR was primarily because of the IncHI1B-like plasmid co-carrying <i>tmexCD2-toprJ2</i> and <i>bla</i><sub>IMP-4</sub>, and an IncFIB(K)/IncFII(K) plasmid harboring <i>bla</i><sub>NDM-1</sub>. Furthermore, the phylogenetic analysis revealed that IncHI1B-like plasmids carrying <i>tmexCD2-toprJ2</i> were disseminated among different bacteria, specifically in China. Additionally, according to the comparative genomic analysis, the MDR regions indicated that the <i>tmexCD2-toprJ2</i> gene cluster was inserted into the <i>umuC</i> gene, while <i>bla</i><sub>IMP-4</sub> was present in transposon Tn<i>As3</i> linked to the class 1 integron (<i>IntI1</i>). It was also observed that an ΔTn<i>3000</i> insertion with <i>bla</i><sub>NDM-1</sub> made a novel <i>bla</i><sub>NDM-1</sub> harboring IncFIB(K)/IncFII(K) plasmid. The antimicrobial resistance prevalence and phylogenetic analyses of <i>K. quasipneumoniae</i> strains indicated that FK8966 is a distinct MDR branch of <i>K. quasipneumoniae</i>. Furthermore, CRISPR-Cas system analysis showed that many <i>K. quasipneumoniae</i> CRISPR-Cas systems lacked spacers matching the two aforementioned novel resistance plasmids, suggesting that these resistance plasmids have the potential to disseminate within <i>K. quasipneumoniae</i>. Therefore, the spread of MDR <i>K. quasipneumoniae</i> and plasmids warrants further attention.IMPORTANCEThe emergence of multidrug-resistant <i>K. quasipneumoniae</i> poses a great threat to clinical care, and the situation is exacerbated by the dissemination of tigecycline- and carbapenem-resistant genes. Therefore, monitoring these pathogens and their resistance plasmids is urgent and crucial. This study identified tigecycline- and carbapenem-resistant <i>K. quasipneumoniae</i> strain, FK8966. Furthermore, it is the first study to report the coexistence of <i>tmexCD2-toprJ2</i>, <i>bla</i><sub>IMP-4</sub>, and <i>bla</i><sub>NDM-1</sub> in <i>K. quasipneumoniae</i>. Moreover, the CRISPR-Cas system of many <i>K. quasipneumoniae</i> lacks spacers that match the plasmids carried by FK8966, which are crucial for mediating resistance against tigecycline and carbapenems, indicating their potential to disseminate within <i>K. quasipneumoniae</i>.

Microbiology SpectrumVol. 12(10)
Wenzhou Medical University (CN), First Affiliated Hospital of Wenzhou Medical University (CN)
Zero hunger
Openalex Percentile: Top 31%
Antibiotic Resistance in Bacteria
0.85
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