Structural Classification Insights Into the Plant Defensive Peptides
This study presents a structural phylogenetic analysis of plant defensive peptides, revealing their evolutionary relationships, structural diversification, and functional adaptations. Utilizing a robust dataset comprising both experimental and predicted structures sourced from the RCSB Protein Data Bank and AlphaFold DB, we constructed a detailed phylogenetic tree to elucidate the distinct evolutionary paths of plant defensive peptide families. Our findings showcase the evolutionary intricacies of defensive peptides, highlighting their diversity and the conservation of key structural motifs critical to their antimicrobial or defensive functions. The results also underscore the adaptive significance of defensive peptides in plant evolution, highlighting their roles in responding to ecological pressures and pathogen interactions.
Authors
- Inda Setyawati (ORCID: https://orcid.org/0000-0001-9861-1755)
- I Made Artika (ORCID: https://orcid.org/0000-0003-4293-3389)
- Laksmi Ambarsari (ORCID: https://orcid.org/0000-0001-8981-792X)
- Aprijal Ghiyas Setiawan (ORCID: https://orcid.org/0000-0002-2882-5181)
- Popi Asri Kurniatin (ORCID: https://orcid.org/0000-0002-9522-2129)
- Keni Vidilaseris (ORCID: https://orcid.org/0000-0002-6453-6600)
- Waras Nurcholis (ORCID: https://orcid.org/0000-0001-7047-5093)
- Ahmad Fadhlullah Husaini
Institutions
- University of Helsinki (FI)
- IPB University (ID)
Publication Details
- Journal
- Proteins Structure Function and Bioinformatics
- Published
- 2024-08-20
- DOI
- https://doi.org/10.1002/prot.26736
- Citations
- 1
- Primary Topic
- Biochemical and Structural Characterization
- Type
- article
- Field-Weighted Citation Impact
- 0.23
Funders
- Kementerian Pendidikan, Kebudayaan, Riset, dan Teknologi