Structural Classification Insights Into the Plant Defensive Peptides

This study presents a structural phylogenetic analysis of plant defensive peptides, revealing their evolutionary relationships, structural diversification, and functional adaptations. Utilizing a robust dataset comprising both experimental and predicted structures sourced from the RCSB Protein Data Bank and AlphaFold DB, we constructed a detailed phylogenetic tree to elucidate the distinct evolutionary paths of plant defensive peptide families. Our findings showcase the evolutionary intricacies of defensive peptides, highlighting their diversity and the conservation of key structural motifs critical to their antimicrobial or defensive functions. The results also underscore the adaptive significance of defensive peptides in plant evolution, highlighting their roles in responding to ecological pressures and pathogen interactions.

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Publication Details

Journal
Proteins Structure Function and Bioinformatics
Published
2024-08-20
DOI
https://doi.org/10.1002/prot.26736
Citations
1
Primary Topic
Biochemical and Structural Characterization
Type
article
Field-Weighted Citation Impact
0.23

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article

Structural Classification Insights Into the Plant Defensive Peptides

Inda Setyawati, I Made Artika, Laksmi Ambarsari, Aprijal Ghiyas Setiawan et al.
1 citations
Proteins Structure Function and Bioinformatics
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article

Structural Classification Insights Into the Plant Defensive Peptides

Inda Setyawati, I Made Artika, Laksmi Ambarsari, Aprijal Ghiyas Setiawan, Popi Asri Kurniatin, Keni Vidilaseris, Waras Nurcholis, Ahmad Fadhlullah Husaini
article en
1 citations

Abstract

This study presents a structural phylogenetic analysis of plant defensive peptides, revealing their evolutionary relationships, structural diversification, and functional adaptations. Utilizing a robust dataset comprising both experimental and predicted structures sourced from the RCSB Protein Data Bank and AlphaFold DB, we constructed a detailed phylogenetic tree to elucidate the distinct evolutionary paths of plant defensive peptide families. Our findings showcase the evolutionary intricacies of defensive peptides, highlighting their diversity and the conservation of key structural motifs critical to their antimicrobial or defensive functions. The results also underscore the adaptive significance of defensive peptides in plant evolution, highlighting their roles in responding to ecological pressures and pathogen interactions.

Proteins Structure Function and BioinformaticsVol. 92(12)
University of Helsinki (FI), IPB University (ID)
Kementerian Pendidikan, Kebudayaan, Riset, dan Teknologi
Life in Land
Openalex Percentile: Top 43%
Biochemical and Structural Characterization
0.23
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