FLUEnT: Transformer for detecting lung consolidations in videos using fused lung ultrasound encodings

Pneumonia is the leading cause of death among children around the world. According to WHO, a total of 740,180 lives under the age of five were lost due to pneumonia in 2019. Lung ultrasound (LUS) has been shown to be particularly useful for supporting the diagnosis of pneumonia in children and reducing mortality in resource-limited settings. The wide application of point-of-care ultrasound at the bedside is limited mainly due to a lack of training for data acquisition and interpretation. Artificial Intelligence can serve as a potential tool to automate and improve the LUS data interpretation process, which mainly involves analysis of hyper-echoic horizontal and vertical artifacts, and hypo-echoic small to large consolidations. This paper presents, Fused Lung Ultrasound Encoding-based Transformer (FLUEnT), a novel pediatric LUS video scoring framework for detecting lung consolidations using fused LUS encodings. Frame-level embeddings from a variational autoencoder, features from a spatially attentive ResNet-18, and encoded patient information as metadata combiningly form the fused encodings. These encodings are then passed on to the transformer for binary classification of the presence or absence of consolidations in the video. The video-level analysis using fused encodings resulted in a mean balanced accuracy of 89.3 %, giving an average improvement of 4.7 % points in comparison to when using these encodings individually. In conclusion, outperforming the state-of-the-art models by an average margin of 8 % points, our proposed FLUEnT framework serves as a benchmark for detecting lung consolidations in LUS videos from pediatric pneumonia patients.

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Publication Details

Journal
Computers in Biology and Medicine
Published
2024-08-19
DOI
https://doi.org/10.1016/j.compbiomed.2024.109014
Citations
7
Primary Topic
Ultrasound in Clinical Applications
Type
article
Field-Weighted Citation Impact
2.95

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article

FLUEnT: Transformer for detecting lung consolidations in videos using fused lung ultrasound encodings

Bindu N. Setty, Umair Khan, Ingrid Camelo, Libertario Demi et al.
7 citations
Computers in Biology and Medicine
Ultrasound in Clinical Applications
2.95
article

FLUEnT: Transformer for detecting lung consolidations in videos using fused lung ultrasound encodings

Bindu N. Setty, Umair Khan, Ingrid Camelo, Libertario Demi, Lauren Etter, Russell G. Thompson‬‬, Ilse Castro-Aragon, Margrit Betke, Christopher C. Gill, Jason Li, Rachel Pieciak
article en
7 citations

Abstract

Pneumonia is the leading cause of death among children around the world. According to WHO, a total of 740,180 lives under the age of five were lost due to pneumonia in 2019. Lung ultrasound (LUS) has been shown to be particularly useful for supporting the diagnosis of pneumonia in children and reducing mortality in resource-limited settings. The wide application of point-of-care ultrasound at the bedside is limited mainly due to a lack of training for data acquisition and interpretation. Artificial Intelligence can serve as a potential tool to automate and improve the LUS data interpretation process, which mainly involves analysis of hyper-echoic horizontal and vertical artifacts, and hypo-echoic small to large consolidations. This paper presents, Fused Lung Ultrasound Encoding-based Transformer (FLUEnT), a novel pediatric LUS video scoring framework for detecting lung consolidations using fused LUS encodings. Frame-level embeddings from a variational autoencoder, features from a spatially attentive ResNet-18, and encoded patient information as metadata combiningly form the fused encodings. These encodings are then passed on to the transformer for binary classification of the presence or absence of consolidations in the video. The video-level analysis using fused encodings resulted in a mean balanced accuracy of 89.3 %, giving an average improvement of 4.7 % points in comparison to when using these encodings individually. In conclusion, outperforming the state-of-the-art models by an average margin of 8 % points, our proposed FLUEnT framework serves as a benchmark for detecting lung consolidations in LUS videos from pediatric pneumonia patients.

Computers in Biology and MedicineVol. 180
University of Massachusetts Dartmouth (US), Boston University (US), Boston Medical Center (US), University of Wisconsin–Madison (US), University of Trento (IT), Augusta University (US), Augusta University Health (US)
European Commission, National Institutes of Health
Zero hunger
Openalex Percentile: Top 9%
Ultrasound in Clinical Applications
2.95
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