SpatialOne: end-to-end analysis of visium data at scale
SpatialOne source code and execution examples are available at https://github.com/Sanofi-Public/spatialone-pipeline, experimental data is available at https://zenodo.org/records/12605154. SpatialOne is distributed as a docker container image.
Authors
- Amrut Sarangi (ORCID: https://orcid.org/0009-0008-9510-7834)
- Sergio M. Villordo (ORCID: https://orcid.org/0000-0003-4434-7930)
- Pavel Senin (ORCID: https://orcid.org/0000-0001-5517-7768)
- Albert Plà (ORCID: https://orcid.org/0000-0001-7527-2500)
- Ziv Bar‐Joseph (ORCID: https://orcid.org/0000-0003-3430-6051)
- Marion Classe (ORCID: https://orcid.org/0000-0002-0802-6585)
- Het Barot (ORCID: https://orcid.org/0009-0002-9328-6492)
- Mena Kamel (ORCID: https://orcid.org/0009-0007-1380-6950)
- Mathew Sunaal
- Ana Solbas
- Seqian Wang
- Luis Cano
Institutions
- Sanofi (France) (FR)
- Sanofi (Spain) (ES)
- Sanofi (United States) (US)
Publication Details
- Journal
- Bioinformatics
- Published
- 2024-08-15
- DOI
- https://doi.org/10.1093/bioinformatics/btae509
- Citations
- 2
- Primary Topic
- Data Visualization and Analytics
- Type
- article
- Field-Weighted Citation Impact
- 0.50
Funders
- Sanofi