Development of a porphyrin based optoelectrical platform for DNA sensing

Optical methods offer exceptional sensitivity for probing intricate biological interactions. Here, we employ a photoactive porphyrin molecule as a sensing probe to monitor DNA hybridisation. We achieved real-time absorption spectral analysis of the DNA binding process by immobilising porphyrin on a U-bent fiber probe. Spectral shifts and intensity changes correlated with DNA binding and hybridization, respectively. Leveraging these spectral signatures, we developed a novel optoelectrical platform for DNA sensing. A porphyrin-based photodiode architecture demonstrated enhanced sensitivity, with a ~1V negative shift in threshold voltage and a threefold increase in photocurrent upon complete DNA hybridization. This platform effectively distinguishes between single-stranded and hybridized DNA, minimising false positives. The proposed optoelectrical approach holds promise for the development of cost-effective, portable DNA sensing devices.

Authors

Institutions

Publication Details

Published
2024-08-16
DOI
https://doi.org/10.1117/12.3032723
Primary Topic
Advanced biosensing and bioanalysis techniques
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Development of a porphyrin based optoelectrical platform for DNA sensing

Kiran Kondabagil, Tapanendu Kundu, Maryam Shojaei Baghini, Amrit Patnaik et al.
Advanced biosensing and bioanalysis techniques
article

Development of a porphyrin based optoelectrical platform for DNA sensing

Kiran Kondabagil, Tapanendu Kundu, Maryam Shojaei Baghini, Amrit Patnaik, Manish Kumar, Geethu Poonhan, Saisree Palli
article en

Abstract

Optical methods offer exceptional sensitivity for probing intricate biological interactions. Here, we employ a photoactive porphyrin molecule as a sensing probe to monitor DNA hybridisation. We achieved real-time absorption spectral analysis of the DNA binding process by immobilising porphyrin on a U-bent fiber probe. Spectral shifts and intensity changes correlated with DNA binding and hybridization, respectively. Leveraging these spectral signatures, we developed a novel optoelectrical platform for DNA sensing. A porphyrin-based photodiode architecture demonstrated enhanced sensitivity, with a ~1V negative shift in threshold voltage and a threefold increase in photocurrent upon complete DNA hybridization. This platform effectively distinguishes between single-stranded and hybridized DNA, minimising false positives. The proposed optoelectrical approach holds promise for the development of cost-effective, portable DNA sensing devices.

Indian Institute of Technology Bombay (IN)
Openalex Percentile: Top 88%
Advanced biosensing and bioanalysis techniques
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Development of a porphyrin based optoelectrical platform for DNA sensing — Kiran Kondabagil, Tapanendu Kundu, et al. · (2024) | TGRS Research Map | TGRS