DNA barcoding confirms the presence of invasive Parachanna obscura and rare species in the Mweru-Luapula fishery

DNA barcoding has recently been instrumental in identifying both invasive and undetected species in aquatic environments. This study aimed at analysing collected fish fin clips to ascertain the identity of native species and the Parachanna species that have invaded the Mweru-Luapula (ML) fishery of Zambia. The identification process was carried out through field phenotypic analysis using species guides and DNA barcoding, with the mitochondrial DNA (mtDNA) cytochrome C oxidase 1 ( COI ) gene fragment. Of the 28 specimens for which DNA was successfully PCR amplified, five matched the reference sequences of species and 22 matched the reference sequences of genera on the NCBI GenBank. Five rare species, namely Oreochromis niloticus, Coptodon zillii, Mormyrus kannume, Thoracochromis buysi and Tylochromis polylepis were identified. The study further affirmed the presence of invasive Parachanna obscura in the fishery and its interconnected water bodies. Parachanna obscura invaded the fishery through annual flooding from aquacultural facilities in the Democratic Republic of Congo (DRC). There is a need to investigate this invasion further by using large specimen sample sizes and also by applying the gonadosomatic index (GSI) to determine invasive species occupancy and impact on native species throughout the fishery. This study provides a platform for further detailed taxonomic verification and species inventory of the entire ML fishery. This will facilitate the development of a viable and sustainable strategy to appropriately curb the impact of invasive species, and will thus contribute to the conservation of the ML aquatic biodiversity.

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Publication Details

Journal
Scientific African
Published
2024-08-15
DOI
https://doi.org/10.1016/j.sciaf.2024.e02335
Citations
2
Primary Topic
Identification and Quantification in Food
Type
article
Field-Weighted Citation Impact
0.47
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article

DNA barcoding confirms the presence of invasive Parachanna obscura and rare species in the Mweru-Luapula fishery

Carel J. Oosthuizen, Bornwell Seemani, Cyprian Katongo, Arrie W. Klopper et al.
2 citations
Scientific African
Identification and Quantification in Food
0.47
article

DNA barcoding confirms the presence of invasive Parachanna obscura and rare species in the Mweru-Luapula fishery

Carel J. Oosthuizen, Bornwell Seemani, Cyprian Katongo, Arrie W. Klopper, Paulette Bloomer
article en
2 citations

Abstract

DNA barcoding has recently been instrumental in identifying both invasive and undetected species in aquatic environments. This study aimed at analysing collected fish fin clips to ascertain the identity of native species and the Parachanna species that have invaded the Mweru-Luapula (ML) fishery of Zambia. The identification process was carried out through field phenotypic analysis using species guides and DNA barcoding, with the mitochondrial DNA (mtDNA) cytochrome C oxidase 1 ( COI ) gene fragment. Of the 28 specimens for which DNA was successfully PCR amplified, five matched the reference sequences of species and 22 matched the reference sequences of genera on the NCBI GenBank. Five rare species, namely Oreochromis niloticus, Coptodon zillii, Mormyrus kannume, Thoracochromis buysi and Tylochromis polylepis were identified. The study further affirmed the presence of invasive Parachanna obscura in the fishery and its interconnected water bodies. Parachanna obscura invaded the fishery through annual flooding from aquacultural facilities in the Democratic Republic of Congo (DRC). There is a need to investigate this invasion further by using large specimen sample sizes and also by applying the gonadosomatic index (GSI) to determine invasive species occupancy and impact on native species throughout the fishery. This study provides a platform for further detailed taxonomic verification and species inventory of the entire ML fishery. This will facilitate the development of a viable and sustainable strategy to appropriately curb the impact of invasive species, and will thus contribute to the conservation of the ML aquatic biodiversity.

Scientific AfricanVol. 25
University of Zambia (ZM), Ministry of Agriculture and Livestock (ZM), University of Pretoria (ZA)
Life below water
Openalex Percentile: Top 36%
Identification and Quantification in Food
0.47
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DNA barcoding confirms the presence of invasive Parachanna obscura and rare species in the Mweru-Luapula fishery — Carel J. Oosthuizen, Bornwell Seemani, et al. · Scientific African (2024) | TGRS Research Map | TGRS