DC-RST: a parallel algorithm for random spanning trees in network analytics
The Mantel Test, discovered in the 1960s, determines whether two distance metrics on a network are related. More recently, DimeCost, an equivalent test with improved computational complexity, was proposed. It was based on computing a random spanning tree of a complete graph on n vertices—the spanning tree was computed using Wilson’s random walk algorithm. In this paper, we describe DC-RST, a parallel, divide-and-conquer random walk algorithm to further speed up this computation. Relative to Wilson’s sequential random-walk algorithm, on a system with 48 cores, DC-RST was up to 4X faster when first creating random partitions and up to 20X faster without this sub-step. DC-RST is shown to be a suitable replacement for the Mantel and DimeCost tests through a combination of theoretical and statistical results.
Authors
- Dinesh P. Mehta (ORCID: https://orcid.org/0000-0002-7521-5781)
- Luke Henke
Institutions
- Colorado School of Mines (US)
Publication Details
- Journal
- Applied Network Science
- Published
- 2024-08-13
- DOI
- https://doi.org/10.1007/s41109-024-00613-7
- Citations
- 1
- Primary Topic
- Complex Network Analysis Techniques
- Type
- article
- Field-Weighted Citation Impact
- 0.28