FloraNER: A new dataset for species and morphological terms named entity recognition in French botanical text

FloraNER is a distantly supervised named entity recognition dataset (NER). The dataset is built from botanical French literature extracted from the OCR-preprocessed flora of New Caledonia, provided by the National Museum of Natural History in France (MNHN), and distantly annotated with a botanical French corpus created by merging botanical lexicons available online. FloraNER comprises separate sub-datasets for the recognition of plant species names, as well as coarse-grained and fine-grained botanical morphological terms. The resulting datasets are in CSV format, displaying textual data, identified named entities, and their annotations, covering one named entity type "Species" (Espèce in French) for species name identification, two named entity types "Organ" and "Descriptor" for coarse-grained morphological term identification, and eight named entity types for fine-grained morphological term identification: Organ, Descriptor, Form, Color, Development, Structure, Surface, Position, Disposition, and Measure. This dataset can be utilized to train and evaluate named entity recognition models for extracting information from botanical French literature.

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Publication Details

Journal
Data in Brief
Published
2024-08-10
DOI
https://doi.org/10.1016/j.dib.2024.110824
Citations
1
Primary Topic
Plant and Fungal Species Descriptions
Type
article
Field-Weighted Citation Impact
0.23

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article

FloraNER: A new dataset for species and morphological terms named entity recognition in French botanical text

Eric Chenin, Jihad Zahir, Hajar Mousannif, Maya Sahraoui et al.
1 citations
Data in Brief
Plant and Fungal Species Descriptions
0.23
article

FloraNER: A new dataset for species and morphological terms named entity recognition in French botanical text

Eric Chenin, Jihad Zahir, Hajar Mousannif, Maya Sahraoui, Régine Vignes‐Lebbe, Ayoub Nainia
article en
1 citations

Abstract

FloraNER is a distantly supervised named entity recognition dataset (NER). The dataset is built from botanical French literature extracted from the OCR-preprocessed flora of New Caledonia, provided by the National Museum of Natural History in France (MNHN), and distantly annotated with a botanical French corpus created by merging botanical lexicons available online. FloraNER comprises separate sub-datasets for the recognition of plant species names, as well as coarse-grained and fine-grained botanical morphological terms. The resulting datasets are in CSV format, displaying textual data, identified named entities, and their annotations, covering one named entity type "Species" (Espèce in French) for species name identification, two named entity types "Organ" and "Descriptor" for coarse-grained morphological term identification, and eight named entity types for fine-grained morphological term identification: Organ, Descriptor, Form, Color, Development, Structure, Surface, Position, Disposition, and Measure. This dataset can be utilized to train and evaluate named entity recognition models for extracting information from botanical French literature.

Data in BriefVol. 56
Cadi Ayyad University (MA), Centre National de la Recherche Scientifique (FR), École Pratique des Hautes Études (FR), Sorbonne Université (FR), Institut de Systématique, Évolution, Biodiversité (FR), Institut Systèmes Intelligents et de Robotique (FR), Unité de Modélisation Mathématique et Informatique des Systèmes Complexes (FR), Institut de Recherche pour le Développement (FR)
European Commission, Agence Nationale de la Recherche, HORIZON EUROPE Framework Programme, HORIZON EUROPE Widening Participation and Strengthening the European Research Area, HORIZON EUROPE Marie Sklodowska-Curie Actions
Openalex Percentile: Top 43%
Plant and Fungal Species Descriptions
0.23
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