Regioselective alkylation of a versatile indazole: Electrophile scope and mechanistic insights from density functional theory calculations
Herein, we report a pair of regioselective <i>N</i> <sup>1</sup>- and <i>N</i> <sup>2</sup> <i>-</i>alkylations of a versatile indazole, methyl 5-bromo-1<i>H</i>-indazole-3-carboxylate (<b>6</b>) and the use of density functional theory (DFT) to evaluate their mechanisms. Over thirty <i>N</i> <sup>1</sup>- and <i>N</i> <sup>2</sup>-alkylated products were isolated in over 90% yield regardless of the conditions. DFT calculations suggest a chelation mechanism produces the <i>N</i> <sup>1</sup>-substituted products when cesium is present and other non-covalent interactions (NCIs) drive the <i>N</i> <sup>2</sup>-product formation. Methyl 1<i>H</i>-indazole-7-carboxylate (<b>18</b>) and 1<i>H</i>-indazole-3-carbonitrile (<b>21</b>) were also subjected to the reaction conditions and their mechanisms were evaluated. The <i>N</i> <sup>1</sup>- and <i>N</i> <sup>2</sup>-partial charges and Fukui indices were calculated for compounds <b>6</b>, <b>18</b>, and <b>21</b> via natural bond orbital (NBO) analyses which further support the suggested reaction pathways.
Authors
- Weihe Zhang (ORCID: https://orcid.org/0000-0003-2923-9130)
- Paul A. Wiget (ORCID: https://orcid.org/0000-0002-5407-6188)
- Luis Juarez
- Pravin L. Kotian (ORCID: https://orcid.org/0000-0002-3694-6506)
- Krishnan Raman (ORCID: https://orcid.org/0000-0002-6532-2567)
- Pengcheng Lu
Institutions
- BioCryst Pharmaceuticals (United States) (US)
Publication Details
- Journal
- Beilstein Journal of Organic Chemistry
- Published
- 2024-08-09
- DOI
- https://doi.org/10.3762/bjoc.20.170
- Citations
- 5
- Primary Topic
- Asymmetric Synthesis and Catalysis
- Type
- article
- Field-Weighted Citation Impact
- 1.25
Funders
- University of Texas at Austin
- BioCryst