Dominance analysis to assess solute contributions to multicomponent phase equilibria

Phase separation in aqueous solutions of macromolecules underlies the generation of biomolecular condensates in cells. Condensates are membraneless bodies, representing dense, macromolecule-rich phases that coexist with the dilute, macromolecule-deficient phases. In cells, condensates comprise hundreds of different macromolecular and small molecule solutes. How do different solutes contribute to the driving forces for phase separation? To answer this question, we introduce a formalism we term energy dominance analysis. This approach rests on analysis of shapes of the dilute phase boundaries, slopes of tie lines, and changes to dilute phase concentrations in response to perturbations of concentrations of different solutes. The framework is based solely on conditions for phase equilibria in systems with arbitrary numbers of macromolecules and solution components. Its practical application relies on being able to measure dilute phase concentrations of the components of interest. The dominance framework is both theoretically facile and experimentally applicable. We present the formalism that underlies dominance analysis and establish its accuracy and flexibility by deploying it to analyze phase diagrams probed in simulations and in experiments.

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Publication Details

Journal
Proceedings of the National Academy of Sciences
Published
2024-08-05
DOI
https://doi.org/10.1073/pnas.2407453121
Citations
19
Primary Topic
RNA Research and Splicing
Type
article
Field-Weighted Citation Impact
4.44

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article

Dominance analysis to assess solute contributions to multicomponent phase equilibria

Tomas Šneideris, Rohit V. Pappu, Tuomas P. J. Knowles, Daoyuan Qian et al.
19 citations
Proceedings of the National Academy of Sciences
RNA Research and Splicing
4.44
article

Dominance analysis to assess solute contributions to multicomponent phase equilibria

Tomas Šneideris, Rohit V. Pappu, Tuomas P. J. Knowles, Daoyuan Qian, Mina Farag, Hannes Ausserwӧger
article en
19 citations

Abstract

Phase separation in aqueous solutions of macromolecules underlies the generation of biomolecular condensates in cells. Condensates are membraneless bodies, representing dense, macromolecule-rich phases that coexist with the dilute, macromolecule-deficient phases. In cells, condensates comprise hundreds of different macromolecular and small molecule solutes. How do different solutes contribute to the driving forces for phase separation? To answer this question, we introduce a formalism we term energy dominance analysis. This approach rests on analysis of shapes of the dilute phase boundaries, slopes of tie lines, and changes to dilute phase concentrations in response to perturbations of concentrations of different solutes. The framework is based solely on conditions for phase equilibria in systems with arbitrary numbers of macromolecules and solution components. Its practical application relies on being able to measure dilute phase concentrations of the components of interest. The dominance framework is both theoretically facile and experimentally applicable. We present the formalism that underlies dominance analysis and establish its accuracy and flexibility by deploying it to analyze phase diagrams probed in simulations and in experiments.

Proceedings of the National Academy of SciencesVol. 121(33)
Washington University in St. Louis (US), University of Cambridge (GB)
National Science Foundation, European Commission, Novo Nordisk, National Institutes of Health, HORIZON EUROPE European Research Council
Affordable and clean energy
Openalex Percentile: Top 5%
RNA Research and Splicing
4.44
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Dominance analysis to assess solute contributions to multicomponent phase equilibria — Tomas Šneideris, Rohit V. Pappu, et al. · Proceedings of the National Academy of Sciences (2024) | TGRS Research Map | TGRS