Amoeba Monte Carlo algorithms for random trees with controlled branching activity: Efficient trial move generation and universal dynamics

The reptation Monte Carlo algorithm is a simple, physically motivated and efficient method for equilibrating semidilute solutions of linear polymers. Here, we propose two simple generalizations for the analog Amoeba algorithm for randomly branching chains, which allow us to efficiently deal with random trees with controlled branching activity. We analyze the rich relaxation dynamics of Amoeba algorithms and demonstrate the existence of an unexpected scaling regime for the tree relaxation. Our results suggest that the equilibration time for Amoeba algorithms scales in general like N^{2}〈n_{lin}〉^{Δ}, where N denotes the number of tree nodes, 〈n_{lin}〉 the mean number of linear segments the trees are composed of, and Δ≃0.4.

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Publication Details

Journal
Physical review. E
Published
2024-10-28
DOI
https://doi.org/10.1103/physreve.110.045312
Citations
5
Primary Topic
Theoretical and Computational Physics
Type
article
Field-Weighted Citation Impact
1.55
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article

Amoeba Monte Carlo algorithms for random trees with controlled branching activity: Efficient trial move generation and universal dynamics

Angelo Rosa, Ralf Everaers, Pieter H. W. van der Hoek
5 citations
Physical review. E
Theoretical and Computational Physics
1.55
article

Amoeba Monte Carlo algorithms for random trees with controlled branching activity: Efficient trial move generation and universal dynamics

Angelo Rosa, Ralf Everaers, Pieter H. W. van der Hoek
article en
5 citations

Abstract

The reptation Monte Carlo algorithm is a simple, physically motivated and efficient method for equilibrating semidilute solutions of linear polymers. Here, we propose two simple generalizations for the analog Amoeba algorithm for randomly branching chains, which allow us to efficiently deal with random trees with controlled branching activity. We analyze the rich relaxation dynamics of Amoeba algorithms and demonstrate the existence of an unexpected scaling regime for the tree relaxation. Our results suggest that the equilibration time for Amoeba algorithms scales in general like N^{2}〈n_{lin}〉^{Δ}, where N denotes the number of tree nodes, 〈n_{lin}〉 the mean number of linear segments the trees are composed of, and Δ≃0.4.

Physical review. EVol. 110(4)
École Normale Supérieure de Lyon (FR), Scuola Internazionale Superiore di Studi Avanzati (IT), Université Clermont Auvergne (FR), Laboratoire de Physique de l'ENS de Lyon (FR), Laboratoire de Physique de l'Ecole Normale Supérieure (FR)
Openalex Percentile: Top 18%
Theoretical and Computational Physics
1.55
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Amoeba Monte Carlo algorithms for random trees with controlled branching activity: Efficient trial move generation and universal dynamics — Angelo Rosa, Ralf Everaers, et al. · Physical review. E (2024) | TGRS Research Map | TGRS