Latest Research in Generative Molecular Representation Architectures

36 research papers · 2026 median publication year

Top Research Topics in Generative Molecular Representation Architectures

Highest-Cited Papers

  1. Scalable molecular representations enabled by multimodal fusion and sequence distillation
  2. Metabolite correlation networks reveal complex phenotypes of adaptation-driving mutations
  3. PRIMITIVE TRANSDUCTION ARCHITECTURE FOR MOLECULAR STRUCTURE RECONSTRUCTION FROM LC-MS/MS SPECTRA
  4. MSIonization: A Machine Learning Tool for Ionization Mode Prediction of Small Molecules
  5. PRIMITIVE TRANSDUCTION ARCHITECTURE FOR MOLECULAR STRUCTURE RECONSTRUCTION FROM LC-MS/MS SPECTRA
  6. Procedural Pretraining for Molecular Property Prediction
  7. Multi-View Molecular Representation Learning with Hierarchical Graphs and Contextualized Fingerprints
  8. Fragment-Based Explainable AI for Pathogen-Selective Antimicrobial Drug Design
  9. SparseEB-gMCR: A Generative Solver for Extreme Sparse Components with Application to Contamination Removal in GC-MS
  10. Integrating artificial intelligence and quantum chemistry for sustainable pharmaceutical retrosynthesis
  11. Integrated experimental and computational evaluation of atractylenolide III from Tubipora musica for anticancer lead identification
  12. ActiveFusion: Fused Representations Improve Active Learning for Molecular Property Prediction
  13. Extrapolation and pharmacokinetic protocol design optimization for ceftriaxone as an exemplar for the development of antibiotics for children
  14. An Explainable Machine Learning Framework for Predicting Blood-Brain Barrier Permeability Using Molecular Descriptors
  15. A set of optimized 3D-MoRSE descriptors for molecular representation
  16. MarkitS: an image-to-SMILES parsing workflow for Markush structures
  17. MolParser-Mobile: Ultrafast OCSR System for Large-Scale Chemical Literature Mining
  18. FigEx2: Visual-Conditioned Panel Detection and Captioning for Scientific Compound Figures
  19. WEECFP-SuRGE: Wide Embedded Extended Connectivity Fingerprint with Substructure Rotary Graph-distance Encoding
  20. GraphNOSE: A Graph Transformer in Olfaction

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L2 Region - - 2026 Sep Q3

Generative Molecular Representation Architectures

36 papers

Top Topics (10)

Machine Learning10
Computational Drug Discovery Methods9
Machine Learning in Materials Science4
Metabolomics and Mass Spectrometry Studies2
Computer Vision and Pattern Recognition2
Quantitative Methods2
Bioinformatics and Genomic Networks1
Mass Spectrometry Techniques and Applications1
Computational Engineering, Finance, and Science1
Chemistry and Chemical Engineering1

Top Publications (20)

1.Scalable molecular representations enabled by multimodal fusion and sequence distillation2.Metabolite correlation networks reveal complex phenotypes of adaptation-driving mutations3.PRIMITIVE TRANSDUCTION ARCHITECTURE FOR MOLECULAR STRUCTURE RECONSTRUCTION FROM LC-MS/MS SPECTRA4.MSIonization: A Machine Learning Tool for Ionization Mode Prediction of Small Molecules5.PRIMITIVE TRANSDUCTION ARCHITECTURE FOR MOLECULAR STRUCTURE RECONSTRUCTION FROM LC-MS/MS SPECTRA6.Procedural Pretraining for Molecular Property Prediction7.Multi-View Molecular Representation Learning with Hierarchical Graphs and Contextualized Fingerprints8.Fragment-Based Explainable AI for Pathogen-Selective Antimicrobial Drug Design9.SparseEB-gMCR: A Generative Solver for Extreme Sparse Components with Application to Contamination Removal in GC-MS10.Integrating artificial intelligence and quantum chemistry for sustainable pharmaceutical retrosynthesis11.Integrated experimental and computational evaluation of atractylenolide III from Tubipora musica for anticancer lead identification12.ActiveFusion: Fused Representations Improve Active Learning for Molecular Property Prediction13.Extrapolation and pharmacokinetic protocol design optimization for ceftriaxone as an exemplar for the development of antibiotics for children14.An Explainable Machine Learning Framework for Predicting Blood-Brain Barrier Permeability Using Molecular Descriptors15.A set of optimized 3D-MoRSE descriptors for molecular representation16.MarkitS: an image-to-SMILES parsing workflow for Markush structures17.MolParser-Mobile: Ultrafast OCSR System for Large-Scale Chemical Literature Mining18.FigEx2: Visual-Conditioned Panel Detection and Captioning for Scientific Compound Figures19.WEECFP-SuRGE: Wide Embedded Extended Connectivity Fingerprint with Substructure Rotary Graph-distance Encoding20.GraphNOSE: A Graph Transformer in Olfaction

Sub-Regions (6)

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